{"updated":"2025-01-21T14:49:12.495835+00:00","metadata":{"_oai":{"id":"oai:ipsj.ixsq.nii.ac.jp:00092652","sets":["1164:5352:7133:7203"]},"path":["7203"],"owner":"11","recid":"92652","title":["Discrimination of symbiotic/parasitic bacterial type III secretion system effector protein using principal component analysis"],"pubdate":{"attribute_name":"公開日","attribute_value":"2013-06-20"},"_buckets":{"deposit":"45a626bb-4f9d-4ea5-b13f-9b538c9d3a11"},"_deposit":{"id":"92652","pid":{"type":"depid","value":"92652","revision_id":0},"owners":[11],"status":"published","created_by":11},"item_title":"Discrimination of symbiotic/parasitic bacterial type III secretion system effector protein using principal component analysis","author_link":["0","0"],"item_titles":{"attribute_name":"タイトル","attribute_value_mlt":[{"subitem_title":"Discrimination of symbiotic/parasitic bacterial type III secretion system effector protein using principal component analysis"},{"subitem_title":"Discrimination of symbiotic/parasitic bacterial type III secretion system effector protein using principal component analysis","subitem_title_language":"en"}]},"item_keyword":{"attribute_name":"キーワード","attribute_value_mlt":[{"subitem_subject":"一般（BIO）","subitem_subject_scheme":"Other"}]},"item_type_id":"4","publish_date":"2013-06-20","item_4_text_3":{"attribute_name":"著者所属","attribute_value_mlt":[{"subitem_text_value":"Department of Physics, Chuo University"},{"subitem_text_value":"Department of Biological Science, Chuo University"},{"subitem_text_value":"Department of Biological Science, Chuo University"},{"subitem_text_value":"Department of Physics, Chuo University"}]},"item_4_text_4":{"attribute_name":"著者所属(英)","attribute_value_mlt":[{"subitem_text_value":"Department of Physics, Chuo University","subitem_text_language":"en"},{"subitem_text_value":"Department of Biological Science, Chuo University","subitem_text_language":"en"},{"subitem_text_value":"Department of Biological Science, Chuo University","subitem_text_language":"en"},{"subitem_text_value":"Department of Physics, Chuo University","subitem_text_language":"en"}]},"item_language":{"attribute_name":"言語","attribute_value_mlt":[{"subitem_language":"eng"}]},"item_publisher":{"attribute_name":"出版者","attribute_value_mlt":[{"subitem_publisher":"情報処理学会","subitem_publisher_language":"ja"}]},"publish_status":"0","weko_shared_id":-1,"item_file_price":{"attribute_name":"Billing file","attribute_type":"file","attribute_value_mlt":[{"url":{"url":"https://ipsj.ixsq.nii.ac.jp/record/92652/files/IPSJ-BIO13034010.pdf"},"date":[{"dateType":"Available","dateValue":"2015-06-20"}],"format":"application/pdf","billing":["billing_file"],"filename":"IPSJ-BIO13034010.pdf","filesize":[{"value":"454.5 kB"}],"mimetype":"application/pdf","priceinfo":[{"tax":["include_tax"],"price":"660","billingrole":"5"},{"tax":["include_tax"],"price":"330","billingrole":"6"},{"tax":["include_tax"],"price":"0","billingrole":"41"},{"tax":["include_tax"],"price":"0","billingrole":"44"}],"accessrole":"open_date","version_id":"ba63e221-8507-4c5a-8ca2-927e23d9d6ba","displaytype":"detail","licensetype":"license_note","license_note":"Copyright (c) 2013 by the Information Processing Society of Japan"}]},"item_4_creator_5":{"attribute_name":"著者名","attribute_type":"creator","attribute_value_mlt":[{"creatorNames":[{"creatorName":"Yuuichi, Nakano"},{"creatorName":"Mitsuo, Iwadate"},{"creatorName":"Hideaki, Umeyama"},{"creatorName":"Y-H.Taguchi"}],"nameIdentifiers":[{}]}]},"item_4_creator_6":{"attribute_name":"著者名(英)","attribute_type":"creator","attribute_value_mlt":[{"creatorNames":[{"creatorName":"Yuuichi, Nakano","creatorNameLang":"en"},{"creatorName":"Mitsuo, Iwadate","creatorNameLang":"en"},{"creatorName":"Hideaki, Umeyama","creatorNameLang":"en"},{"creatorName":"Y-H., Taguchi","creatorNameLang":"en"}],"nameIdentifiers":[{}]}]},"item_4_source_id_9":{"attribute_name":"書誌レコードID","attribute_value_mlt":[{"subitem_source_identifier":"AA12055912","subitem_source_identifier_type":"NCID"}]},"item_4_textarea_12":{"attribute_name":"Notice","attribute_value_mlt":[{"subitem_textarea_value":"SIG Technical Reports are nonrefereed and hence may later appear in any journals, conferences, symposia, etc."}]},"item_resource_type":{"attribute_name":"資源タイプ","attribute_value_mlt":[{"resourceuri":"http://purl.org/coar/resource_type/c_18gh","resourcetype":"technical report"}]},"item_4_description_7":{"attribute_name":"論文抄録","attribute_value_mlt":[{"subitem_description":"Type III secretion system (T3SS) effector protein is a part of bacterial secretion systems. T3SS exists in the pathogenic and symbiotic bacteria. How the T3SS effector proteins in these two classes differ from each other should be interesting. In this paper, we proposed the usage of principal component analysis based linear discriminant analysis that discriminates T3SS effector proteins between plant pathogenic, animal pathogenic and plant symbiotic bacteria by the accuracy of 0.77. We also hypothesized that the feature vector proposed by Yahara et al represents protein structure, possibly protein folds defined in Structural Classification of Proteins (SCOP) database.","subitem_description_type":"Other"}]},"item_4_description_8":{"attribute_name":"論文抄録(英)","attribute_value_mlt":[{"subitem_description":"Type III secretion system (T3SS) effector protein is a part of bacterial secretion systems. T3SS exists in the pathogenic and symbiotic bacteria. How the T3SS effector proteins in these two classes differ from each other should be interesting. In this paper, we proposed the usage of principal component analysis based linear discriminant analysis that discriminates T3SS effector proteins between plant pathogenic, animal pathogenic and plant symbiotic bacteria by the accuracy of 0.77. We also hypothesized that the feature vector proposed by Yahara et al represents protein structure, possibly protein folds defined in Structural Classification of Proteins (SCOP) database.","subitem_description_type":"Other"}]},"item_4_biblio_info_10":{"attribute_name":"書誌情報","attribute_value_mlt":[{"bibliographicPageEnd":"8","bibliographic_titles":[{"bibliographic_title":"研究報告バイオ情報学（BIO）"}],"bibliographicPageStart":"1","bibliographicIssueDates":{"bibliographicIssueDate":"2013-06-20","bibliographicIssueDateType":"Issued"},"bibliographicIssueNumber":"10","bibliographicVolumeNumber":"2013-BIO-34"}]},"relation_version_is_last":true,"weko_creator_id":"11"},"created":"2025-01-18T23:41:29.374808+00:00","id":92652,"links":{}}