{"metadata":{"_oai":{"id":"oai:ipsj.ixsq.nii.ac.jp:00070259","sets":["934:1160:6049"]},"path":["6049"],"owner":"10","recid":"70259","title":["Automatic Pipeline Construction Focused on Similarity of Rate Law Functions for an FPGA-based Biochemical Simulator"],"pubdate":{"attribute_name":"公開日","attribute_value":"2010-08-16"},"_buckets":{"deposit":"9876df56-a7d0-40b8-9313-e10ea7bd7180"},"_deposit":{"id":"70259","pid":{"type":"depid","value":"70259","revision_id":0},"owners":[10],"status":"published","created_by":10},"item_title":"Automatic Pipeline Construction Focused on Similarity of Rate Law Functions for an FPGA-based Biochemical Simulator","author_link":["0","0"],"item_titles":{"attribute_name":"タイトル","attribute_value_mlt":[{"subitem_title":"Automatic Pipeline Construction Focused on Similarity of Rate Law Functions for an FPGA-based Biochemical Simulator"},{"subitem_title":"Automatic Pipeline Construction Focused on Similarity of Rate Law Functions for an FPGA-based Biochemical Simulator","subitem_title_language":"en"}]},"item_keyword":{"attribute_name":"キーワード","attribute_value_mlt":[{"subitem_subject":"Behavioral Area Optimization","subitem_subject_scheme":"Other"}]},"item_type_id":"3","publish_date":"2010-08-16","item_3_text_3":{"attribute_name":"著者所属","attribute_value_mlt":[{"subitem_text_value":"Nagasaki University"},{"subitem_text_value":"Nagasaki University"},{"subitem_text_value":"Nagasaki University"},{"subitem_text_value":"Nagasaki University"},{"subitem_text_value":"Seikei University"},{"subitem_text_value":"Doshisha University"},{"subitem_text_value":"Keio University"},{"subitem_text_value":"Keio University"},{"subitem_text_value":"Keio University"},{"subitem_text_value":"Keio University"},{"subitem_text_value":"Nagasaki University"},{"subitem_text_value":"Nagasaki University"}]},"item_3_text_4":{"attribute_name":"著者所属(英)","attribute_value_mlt":[{"subitem_text_value":"Nagasaki 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University","subitem_text_language":"en"}]},"item_language":{"attribute_name":"言語","attribute_value_mlt":[{"subitem_language":"eng"}]},"item_publisher":{"attribute_name":"出版者","attribute_value_mlt":[{"subitem_publisher":"情報処理学会","subitem_publisher_language":"ja"}]},"publish_status":"0","weko_shared_id":10,"item_file_price":{"attribute_name":"Billing file","attribute_type":"file","attribute_value_mlt":[{"url":{"url":"https://ipsj.ixsq.nii.ac.jp/record/70259/files/IPSJ-TSLDM0300020.pdf","label":"IPSJ-TSLDM0300020"},"date":[{"dateType":"Available","dateValue":"2012-08-16"}],"format":"application/pdf","billing":["billing_file"],"filename":"IPSJ-TSLDM0300020.pdf","filesize":[{"value":"743.0 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Oguri","creatorNameLang":"en"}],"nameIdentifiers":[{}]}]},"item_3_source_id_9":{"attribute_name":"書誌レコードID","attribute_value_mlt":[{"subitem_source_identifier":"AA12394951","subitem_source_identifier_type":"NCID"}]},"item_resource_type":{"attribute_name":"資源タイプ","attribute_value_mlt":[{"resourceuri":"http://purl.org/coar/resource_type/c_6501","resourcetype":"journal article"}]},"item_3_source_id_11":{"attribute_name":"ISSN","attribute_value_mlt":[{"subitem_source_identifier":"1882-6687","subitem_source_identifier_type":"ISSN"}]},"item_3_description_7":{"attribute_name":"論文抄録","attribute_value_mlt":[{"subitem_description":"For FPGA-based scientific simulation systems, hardware design technique that can reduce required amount of hardware resources is a key issue, since the size of simulation target is often limited by the size of the FPGA. Focusing on FPGA-based biochemical simulation, this paper proposes hardware design methodology which finds and combines common datapath for similar rate law functions appeared in simulation target models, so as to generate area-effective pipelined hardware modules. In addition, similarity-based clustering techniques of rate law functions are also presented in order to alleviate negative effects on performance for combined pipelines. Empirical evaluation with a practical biochemical model reveals that our method enables the simulation with 66% of the original hardware resources at a reasonable cost of 20% performance overhead.","subitem_description_type":"Other"}]},"item_3_description_8":{"attribute_name":"論文抄録(英)","attribute_value_mlt":[{"subitem_description":"For FPGA-based scientific simulation systems, hardware design technique that can reduce required amount of hardware resources is a key issue, since the size of simulation target is often limited by the size of the FPGA. Focusing on FPGA-based biochemical simulation, this paper proposes hardware design methodology which finds and combines common datapath for similar rate law functions appeared in simulation target models, so as to generate area-effective pipelined hardware modules. In addition, similarity-based clustering techniques of rate law functions are also presented in order to alleviate negative effects on performance for combined pipelines. Empirical evaluation with a practical biochemical model reveals that our method enables the simulation with 66% of the original hardware resources at a reasonable cost of 20% performance overhead.","subitem_description_type":"Other"}]},"item_3_biblio_info_10":{"attribute_name":"書誌情報","attribute_value_mlt":[{"bibliographicPageEnd":"256","bibliographic_titles":[{"bibliographic_title":"IPSJ Transactions on System LSI Design Methodology(TSLDM)"}],"bibliographicPageStart":"244","bibliographicIssueDates":{"bibliographicIssueDate":"2010-08-16","bibliographicIssueDateType":"Issued"},"bibliographicVolumeNumber":"3"}]},"relation_version_is_last":true,"weko_creator_id":"10"},"id":70259,"updated":"2025-01-21T22:38:20.922266+00:00","links":{},"created":"2025-01-18T23:29:31.881042+00:00"}