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Phylogenetic Tree Distance Calculation Based on Petri Net
https://ipsj.ixsq.nii.ac.jp/records/241339
https://ipsj.ixsq.nii.ac.jp/records/24133975d9b2b1-41e6-4c2b-b246-65e99905279c
| 名前 / ファイル | ライセンス | アクション |
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IPSJ-BIO24080011.pdf (850.8 kB)
2026年11月27日からダウンロード可能です。
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Copyright (c) 2024 by the Information Processing Society of Japan
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| 非会員：¥660, IPSJ:学会員：¥330, BIO:会員：¥0, DLIB:会員：¥0 | ||
| Item type | SIG Technical Reports(1) | |||||||||
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| 公開日 | 2024-11-27 | |||||||||
| タイトル | ||||||||||
| タイトル | Phylogenetic Tree Distance Calculation Based on Petri Net | |||||||||
| タイトル | ||||||||||
| 言語 | en | |||||||||
| タイトル | Phylogenetic Tree Distance Calculation Based on Petri Net | |||||||||
| 言語 | ||||||||||
| 言語 | eng | |||||||||
| 資源タイプ | ||||||||||
| 資源タイプ識別子 | http://purl.org/coar/resource_type/c_18gh | |||||||||
| 資源タイプ | technical report | |||||||||
| 著者所属 | ||||||||||
| Volapu Research | ||||||||||
| 著者所属 | ||||||||||
| Volapu Research | ||||||||||
| 著者所属(英) | ||||||||||
| en | ||||||||||
| Volapu Research | ||||||||||
| 著者所属(英) | ||||||||||
| en | ||||||||||
| Volapu Research | ||||||||||
| 著者名 |
Deyang, Liu
× Deyang, Liu
× Joseph, K.H. Wang
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| 著者名(英) |
Deyang, Liu
× Deyang, Liu
× Joseph, K.H. Wang
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| 論文抄録 | ||||||||||
| 内容記述タイプ | Other | |||||||||
| 内容記述 | Phylogenetic trees are graphical representations of evolutionary relationships. Traditional distance metrics often focus on tree topology or branch lengths, neglecting the dynamic nature of biological systems. This paper introduces a novel approach using Petri nets to model phylogenetic trees as dynamic systems. By converting phylogenetic trees into weighted coloured Petri nets, we can simulate evolutionary processes and calculate distances based on the shortest paths between species. This method offers a more comprehensive and accurate assessment of phylogenetic relationships, capturing complex evolutionary dynamics not addressed by traditional methods. | |||||||||
| 論文抄録(英) | ||||||||||
| 内容記述タイプ | Other | |||||||||
| 内容記述 | Phylogenetic trees are graphical representations of evolutionary relationships. Traditional distance metrics often focus on tree topology or branch lengths, neglecting the dynamic nature of biological systems. This paper introduces a novel approach using Petri nets to model phylogenetic trees as dynamic systems. By converting phylogenetic trees into weighted coloured Petri nets, we can simulate evolutionary processes and calculate distances based on the shortest paths between species. This method offers a more comprehensive and accurate assessment of phylogenetic relationships, capturing complex evolutionary dynamics not addressed by traditional methods. | |||||||||
| 書誌レコードID | ||||||||||
| 収録物識別子タイプ | NCID | |||||||||
| 収録物識別子 | AA12055912 | |||||||||
| 書誌情報 |
研究報告バイオ情報学（BIO） 巻 2024-BIO-80, 号 11, p. 1-4, 発行日 2024-11-27 |
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| ISSN | ||||||||||
| 収録物識別子タイプ | ISSN | |||||||||
| 収録物識別子 | 2188-8590 | |||||||||
| Notice | ||||||||||
| SIG Technical Reports are nonrefereed and hence may later appear in any journals, conferences, symposia, etc. | ||||||||||
| 出版者 | ||||||||||
| 言語 | ja | |||||||||
| 出版者 | 情報処理学会 | |||||||||
