| Item type |
SIG Technical Reports(1) |
| 公開日 |
2021-06-21 |
| タイトル |
|
|
タイトル |
Identification of Enhancers and Promoters in the Genome by Multi-Dimensional Scaling |
| タイトル |
|
|
言語 |
en |
|
タイトル |
Identification of Enhancers and Promoters in the Genome by Multi-Dimensional Scaling |
| 言語 |
|
|
言語 |
eng |
| キーワード |
|
|
主題Scheme |
Other |
|
主題 |
バイオ情報学 (2) |
| 資源タイプ |
|
|
資源タイプ識別子 |
http://purl.org/coar/resource_type/c_18gh |
|
資源タイプ |
technical report |
| 著者所属 |
|
|
|
Chuo University Faculty of Science and Engineering |
| 著者所属 |
|
|
|
Chuo University Faculty of Science and Engineering |
| 著者所属(英) |
|
|
|
en |
|
|
Chuo University Faculty of Science and Engineering |
| 著者所属(英) |
|
|
|
en |
|
|
Chuo University Faculty of Science and Engineering |
| 著者名 |
Ryo, Ishibashi
Y-H, Taguchi
|
| 著者名(英) |
Ryo, Ishibashi
Y-H, Taguchi
|
| 論文抄録 |
|
|
内容記述タイプ |
Other |
|
内容記述 |
The position of the enhancers on genomic DNA remains poorly understood. During phase of cell division cycle, since genome forms chromatin structure and spreads within the nucleus, can not observe chromosomes. There is method called Hi-C (High - throughput chromosome conformation capture) that measures physical interaction of genomes. In previous studies, DNA extrusion loops were directly derived from Hi-C heat maps. In this paper, we show that MDS (Multi-Dimensional Scaling) can be used to locate enhancers and promoters more precisely. |
| 論文抄録(英) |
|
|
内容記述タイプ |
Other |
|
内容記述 |
The position of the enhancers on genomic DNA remains poorly understood. During phase of cell division cycle, since genome forms chromatin structure and spreads within the nucleus, can not observe chromosomes. There is method called Hi-C (High - throughput chromosome conformation capture) that measures physical interaction of genomes. In previous studies, DNA extrusion loops were directly derived from Hi-C heat maps. In this paper, we show that MDS (Multi-Dimensional Scaling) can be used to locate enhancers and promoters more precisely. |
| 書誌レコードID |
|
|
収録物識別子タイプ |
NCID |
|
収録物識別子 |
AN10505667 |
| 書誌情報 |
研究報告数理モデル化と問題解決（MPS）
巻 2021-MPS-133,
号 27,
p. 1-4,
発行日 2021-06-21
|
| ISSN |
|
|
収録物識別子タイプ |
ISSN |
|
収録物識別子 |
2188-8833 |
| Notice |
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|
SIG Technical Reports are nonrefereed and hence may later appear in any journals, conferences, symposia, etc. |
| 出版者 |
|
|
言語 |
ja |
|
出版者 |
情報処理学会 |
IPSJ-MPS21133027.pdf (665.0 kB)
